Chromobacterium subtsugae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Chromobacteriaceae; g__Chromobacterium; s__Chromobacterium subtsugae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Chromobacteriaceae; g__Chromobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Chromobacteriaceae; x__Chromobacterium group; g__Chromobacterium; s__Chromobacterium sp. F49
NCBI Strain Identifiers F49
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001676875.1)
Genome Characteristics
CheckM Completeness 99.04%
CheckM Contamination 0.45%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 87
N50 Contigs 200,856 bp
Longest Contig 378,467 bp
Scaffold Count 87
N50 Scaffolds 200,856 bp
Longest Scaffold 378,467 bp
Genome Size 4,696,967 bp
Protein Count 4,358
Coding Density 89.18%
GC Percentage 64.78%
Ambiguous Bases N/A
GTDB representative GCA_001676875.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM161986v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04387808
Country Malaysia: Perak
Date 2016-4-13
Genbank Assembly Accession GCA_001619865.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Ulu Slim Hot Spring
Latitude Longitude None
Molecule Count N/A
CDS Count 4,348
Refseq Category na
Seq Rel Date 2016/04/13
Spanned Gaps 0
Species Taxid 1777131
SSU Count 1
Submitter University of Malaya
Taxid 1777131
Total Gap Length 0
Translation Table 11
tRNA Count (total) 77
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LQNP00000000.1