Nocardia arizonensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Nocardia; s__Nocardia arizonensis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Nocardiaceae; g__Nocardia; s__Nocardia arizonensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Nocardiaceae; g__Nocardia; s__Nocardia arizonensis
NCBI Strain Identifiers NBRC 108935
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_001310275.1)
Genome Characteristics
CheckM Completeness 99.31%
CheckM Contamination 3.45%
CheckM Strain Heterogeneity 5.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 99
N50 Contigs 159,793 bp
Longest Contig 486,213 bp
Scaffold Count 99
N50 Scaffolds 159,793 bp
Longest Scaffold 486,213 bp
Genome Size 7,201,976 bp
Protein Count 6,618
Coding Density 88.12%
GC Percentage 67.94%
Ambiguous Bases N/A
GTDB representative GCA_001310275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM161840v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00050603
Country None
Date 2016-4-6
Genbank Assembly Accession GCA_001618405.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,505
Refseq Category na
Seq Rel Date 2016/04/06
Spanned Gaps 0
Species Taxid 1141647
SSU Count 1
Submitter National Institute of Technology and Evaluation Biological Resource Center
Taxid 1141647
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BDCT00000000.1