Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers RIVM6519
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 98.76%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 3
N50 Contigs 2,786,116 bp
Longest Contig 2,786,116 bp
Scaffold Count 3
N50 Scaffolds 2,786,116 bp
Longest Scaffold 2,786,116 bp
Genome Size 2,793,465 bp
Protein Count 2,564
Coding Density 83.65%
GC Percentage 32.86%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM161830v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04590098
Country Netherlands: Bilthoven
Date 2016-4-11
Genbank Assembly Accession GCA_001618305.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source unavailable
Latitude Longitude 52.13 N 5.210 E
Molecule Count 3
CDS Count 2,824
Refseq Category na
Seq Rel Date 2016/04/11
Spanned Gaps 0
Species Taxid 1280
SSU Count 5
Submitter RIVM
Taxid 1280
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None