Yersinia enterocolitica
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia enterocolitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica; sb__Yersinia enterocolitica subsp. enterocolitica; x__Yersinia enterocolitica subsp. enterocolitica NBRC 105693
NCBI Strain Identifiers NBRC 105693
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_901472495.1)
Genome Characteristics
CheckM Completeness 99.95%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 2
tRNA Count 18
Contig Count 60
N50 Contigs 188,210 bp
Longest Contig 369,212 bp
Scaffold Count 60
N50 Scaffolds 188,210 bp
Longest Scaffold 369,212 bp
Genome Size 4,472,130 bp
Protein Count 4,072
Coding Density 85.60%
GC Percentage 47.25%
Ambiguous Bases N/A
GTDB representative GCA_901472495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM159873v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00046906
Country None
Date 2016-3-11
Genbank Assembly Accession GCA_001598735.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,111
Refseq Category na
Seq Rel Date 2016/03/11
Spanned Gaps 0
Species Taxid 630
SSU Count 1
Submitter National Institute of Technology and Evaluation
Taxid 1218100
Total Gap Length 0
Translation Table 11
tRNA Count (total) 69
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BCZM00000000.1