Thermobifida fusca
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptosporangiales; f__Streptosporangiaceae; g__Thermobifida; s__Thermobifida fusca
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptosporangiales; f__Nocardiopsaceae; g__Thermobifida; s__Thermobifida fusca
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptosporangiales; f__Nocardiopsaceae; g__Thermobifida; s__Thermobifida fusca; x__Thermobifida fusca NBRC 14071 = JCM 3263
NCBI Strain Identifiers NBRC 14071
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (6 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.82%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 82
N50 Contigs 72,502 bp
Longest Contig 292,526 bp
Scaffold Count 82
N50 Scaffolds 72,502 bp
Longest Scaffold 292,526 bp
Genome Size 3,643,897 bp
Protein Count 3,200
Coding Density 84.55%
GC Percentage 67.54%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM159204v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00046774
Country None
Date 2016-2-27
Genbank Assembly Accession GCA_001592045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,131
Refseq Category na
Seq Rel Date 2016/02/27
Spanned Gaps 0
Species Taxid 2021
SSU Count 1
Submitter National Institute of Technology and Evaluation
Taxid 1223522
Total Gap Length 0
Translation Table 11
tRNA Count (total) 53
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BCWB00000000.1