Lactobacillus acidophilus
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus acidophilus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus acidophilus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus acidophilus; x__Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951
NCBI Strain Identifiers NBRC 13951
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (37 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.94%
CheckM Contamination 0.06%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 18
N50 Contigs 242,421 bp
Longest Contig 837,565 bp
Scaffold Count 18
N50 Scaffolds 242,421 bp
Longest Scaffold 837,565 bp
Genome Size 1,955,274 bp
Protein Count 1,880
Coding Density 89.26%
GC Percentage 34.59%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM159184v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00046914
Country None
Date 2016-2-27
Genbank Assembly Accession GCA_001591845.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,888
Refseq Category na
Seq Rel Date 2016/02/27
Spanned Gaps 0
Species Taxid 1579
SSU Count 1
Submitter National Institute of Technology and Evaluation
Taxid 1423717
Total Gap Length 0
Translation Table 11
tRNA Count (total) 55
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BCVR00000000.1