Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio nereis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio nereis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio nereis; x__Vibrio nereis NBRC 15637
NCBI Strain Identifiers NBRC 15637
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.77%
CheckM Contamination 0.32%
CheckM Strain Heterogeneity 28.57
5S Count 1
16S Count 1
23S Count 1
tRNA Count 16
Contig Count 66
N50 Contigs 227,762 bp
Longest Contig 646,187 bp
Scaffold Count 66
N50 Scaffolds 227,762 bp
Longest Scaffold 646,187 bp
Genome Size 4,085,582 bp
Protein Count 3,750
Coding Density 87.91%
GC Percentage 45.43%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM159110v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00046758
Country None
Date 2016-2-23
Genbank Assembly Accession GCA_001591105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,776
Refseq Category na
Seq Rel Date 2016/02/23
Spanned Gaps 0
Species Taxid 693
SSU Count 1
Submitter National Institute of Technology and Evaluation
Taxid 1219068
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BCUD00000000.1