Streptococcus sanguinis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sanguinis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sanguinis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sanguinis
NCBI Strain Identifiers PJM8
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000194945.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.37%
CheckM Strain Heterogeneity 44.44
5S Count 1
16S Count 1
23S Count 4
tRNA Count 19
Contig Count 162
N50 Contigs 396,031 bp
Longest Contig 830,973 bp
Scaffold Count 162
N50 Scaffolds 396,031 bp
Longest Scaffold 830,973 bp
Genome Size 2,367,896 bp
Protein Count 2,372
Coding Density 89.57%
GC Percentage 43.19%
Ambiguous Bases N/A
GTDB representative GCA_000194945.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM158901v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03480699
Country United Kingdom
Date 2016-3-11
Genbank Assembly Accession GCA_001589015.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Oral Cavity
Latitude Longitude 55 N 1.6 W
Molecule Count N/A
CDS Count 2,414
Refseq Category na
Seq Rel Date 2016/03/11
Spanned Gaps 0
Species Taxid 1305
SSU Count 1
Submitter University of Malaya
Taxid 1305
Total Gap Length 0
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LAYH00000000.1