Citrobacter freundii
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter freundii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; x__Citrobacter freundii complex; s__Citrobacter sp. AATXQ
NCBI Strain Identifiers AATXQ
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900635425.1)
Genome Characteristics
CheckM Completeness 99.7%
CheckM Contamination 0.36%
CheckM Strain Heterogeneity 0.0
5S Count 9
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 92
N50 Contigs 157,015 bp
Longest Contig 311,856 bp
Scaffold Count 92
N50 Scaffolds 157,015 bp
Longest Scaffold 311,856 bp
Genome Size 4,883,916 bp
Protein Count 4,648
Coding Density 88.57%
GC Percentage 52.01%
Ambiguous Bases N/A
GTDB representative GCA_900635425.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM158683v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03455927
Country USA
Date 2016-3-10
Genbank Assembly Accession GCA_001586835.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 38.984652 N 77.094709 W
Molecule Count N/A
CDS Count 4,791
Refseq Category na
Seq Rel Date 2016/03/10
Spanned Gaps 0
Species Taxid 1779184
SSU Count 2
Submitter NHGRI
Taxid 1779184
Total Gap Length 0
Translation Table 11
tRNA Count (total) 75
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LUGC00000000.1