Listeria monocytogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers MF4077
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900187225.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.82%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 14
N50 Contigs 438,935 bp
Longest Contig 700,700 bp
Scaffold Count 14
N50 Scaffolds 438,935 bp
Longest Scaffold 700,700 bp
Genome Size 3,009,599 bp
Protein Count 2,982
Coding Density 89.76%
GC Percentage 37.82%
Ambiguous Bases N/A
GTDB representative GCA_900187225.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM158632v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04404360
Country Norway
Date 2016-3-10
Genbank Assembly Accession GCA_001586325.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source salmon processing facility
Latitude Longitude None
Molecule Count N/A
CDS Count 3,030
Refseq Category na
Seq Rel Date 2016/03/10
Spanned Gaps 0
Species Taxid 1639
SSU Count 1
Submitter Nofima
Taxid 1639
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LQXC00000000.1