Listeria monocytogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers MF5369
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900187225.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.82%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 14
N50 Contigs 579,519 bp
Longest Contig 700,425 bp
Scaffold Count 14
N50 Scaffolds 579,519 bp
Longest Scaffold 700,425 bp
Genome Size 3,008,780 bp
Protein Count 2,986
Coding Density 89.80%
GC Percentage 37.83%
Ambiguous Bases N/A
GTDB representative GCA_900187225.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM158631v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04009323
Country Norway
Date 2016-3-10
Genbank Assembly Accession GCA_001586315.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source poultry processing facility
Latitude Longitude None
Molecule Count N/A
CDS Count 3,030
Refseq Category na
Seq Rel Date 2016/03/10
Spanned Gaps 0
Species Taxid 1639
SSU Count 1
Submitter Nofima
Taxid 1639
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LKUY00000000.1