Streptococcus pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Genome Characteristics
CheckM Completeness 99.81%
CheckM Contamination 0.21%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 66
N50 Contigs 93,261 bp
Longest Contig 383,119 bp
Scaffold Count 66
N50 Scaffolds 93,261 bp
Longest Scaffold 383,119 bp
Genome Size 1,995,222 bp
Protein Count 1,998
Coding Density 86.10%
GC Percentage 39.69%
Ambiguous Bases 0
GTDB representative GCA_001457635.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM158567v1
Assembly Type na
Bioproject PRJNA224116
Biosample SAMN03946416
Country USA: North Dakota
Date 2016-03-10
Genbank Assembly Accession GCA_001585675.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude None
Molecule Count N/A
CDS Count 2,121
Refseq Category na
Seq Rel Date 2016/03/10
Spanned Gaps 0
Species Taxid 1313
SSU Count 1
Submitter University of Toronto
Taxid 1313
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJMJ00000000.1