Mycobacterium phlei
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium phlei
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycolicibacterium; s__Mycolicibacterium phlei
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycolicibacterium; s__Mycolicibacterium phlei
NCBI Strain Identifiers CCUG 21000
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (8 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.15%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 5,349,645 bp
Longest Contig 5,349,645 bp
Scaffold Count 1
N50 Scaffolds 5,349,645 bp
Longest Scaffold 5,349,645 bp
Genome Size 5,349,645 bp
Protein Count 5,162
Coding Density 93.05%
GC Percentage 69.44%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM158341v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04481318
Country None
Date 2016-03-08
Genbank Assembly Accession GCA_001583415.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source environment
Latitude Longitude None
Molecule Count 1
CDS Count 5,090
Refseq Category representative genome
Seq Rel Date 2016/03/08
Spanned Gaps 0
Species Taxid 1771
SSU Count 2
Submitter Uppsala University
Taxid 1771
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None