Legionella pneumophila
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
NCBI Strain Identifiers WD_4_1102a
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000008485.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 44
N50 Contigs 153,112 bp
Longest Contig 421,662 bp
Scaffold Count 42
N50 Scaffolds 153,112 bp
Longest Scaffold 421,662 bp
Genome Size 3,251,458 bp
Protein Count 2,888
Coding Density 88.15%
GC Percentage 38.15%
Ambiguous Bases N/A
GTDB representative GCA_000008485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM158248v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03480704
Country China: Beijing
Date 2016-3-8
Genbank Assembly Accession GCA_001582485.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Hot spring water
Latitude Longitude None
Molecule Count N/A
CDS Count 2,924
Refseq Category na
Seq Rel Date 2016/03/08
Spanned Gaps 2
Species Taxid 446
SSU Count 1
Submitter National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr
Taxid 446
Total Gap Length 20
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LBAE00000000.1