Legionella pneumophila
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
NCBI Strain Identifiers ATCC 33823
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000008485.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 47
N50 Contigs 124,514 bp
Longest Contig 298,945 bp
Scaffold Count 46
N50 Scaffolds 124,514 bp
Longest Scaffold 298,945 bp
Genome Size 3,303,037 bp
Protein Count 2,953
Coding Density 88.11%
GC Percentage 38.20%
Ambiguous Bases N/A
GTDB representative GCA_000008485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM158230v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03481694
Country None
Date 2016-3-8
Genbank Assembly Accession GCA_001582305.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Showerhead
Latitude Longitude None
Molecule Count N/A
CDS Count 2,976
Refseq Category na
Seq Rel Date 2016/03/08
Spanned Gaps 1
Species Taxid 446
SSU Count 1
Submitter National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr
Taxid 446
Total Gap Length 10
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LAXX00000000.1