Legionella pneumophila
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
NCBI Strain Identifiers JX1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000008485.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 41
N50 Contigs 208,120 bp
Longest Contig 525,957 bp
Scaffold Count 40
N50 Scaffolds 219,461 bp
Longest Scaffold 525,957 bp
Genome Size 3,649,843 bp
Protein Count 3,277
Coding Density 88.40%
GC Percentage 38.23%
Ambiguous Bases N/A
GTDB representative GCA_000008485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM158224v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03481690
Country China: Nanchang
Date 2016-3-8
Genbank Assembly Accession GCA_001582245.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Cooling tower water
Latitude Longitude None
Molecule Count N/A
CDS Count 3,300
Refseq Category na
Seq Rel Date 2016/03/08
Spanned Gaps 1
Species Taxid 446
SSU Count 1
Submitter National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr
Taxid 446
Total Gap Length 10
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LAXU00000000.1