Legionella pneumophila
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
NCBI Strain Identifiers JNLH86
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000008485.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 44
N50 Contigs 221,349 bp
Longest Contig 525,671 bp
Scaffold Count 41
N50 Scaffolds 262,348 bp
Longest Scaffold 525,671 bp
Genome Size 3,711,534 bp
Protein Count 3,348
Coding Density 88.08%
GC Percentage 38.31%
Ambiguous Bases N/A
GTDB representative GCA_000008485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM158214v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03480743
Country China: Jinan
Date 2016-3-8
Genbank Assembly Accession GCA_001582145.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Tap water
Latitude Longitude None
Molecule Count N/A
CDS Count 3,361
Refseq Category na
Seq Rel Date 2016/03/08
Spanned Gaps 3
Species Taxid 446
SSU Count 1
Submitter National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr
Taxid 446
Total Gap Length 30
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LAXO00000000.1