Enterococcus_B faecium
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_B; s__Enterococcus_B faecium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium; x__Enterococcus faecium C68
NCBI Strain Identifiers C68
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001544255.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 100.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 7
N50 Contigs 2,163,865 bp
Longest Contig 2,163,865 bp
Scaffold Count 7
N50 Scaffolds 2,163,865 bp
Longest Scaffold 2,163,865 bp
Genome Size 3,230,697 bp
Protein Count 3,146
Coding Density 84.75%
GC Percentage 37.83%
Ambiguous Bases N/A
GTDB representative GCA_001544255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM158210v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04338411
Country USA: Ohio
Date 2016-3-8
Genbank Assembly Accession GCA_001582105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Clinical isolate
Latitude Longitude 41.4822 N 81.66970000000003 W
Molecule Count 4
CDS Count 3,267
Refseq Category na
Seq Rel Date 2016/03/08
Spanned Gaps 0
Species Taxid 1352
SSU Count 6
Submitter Brown University/Rhode Island Hospital
Taxid 565664
Total Gap Length 0
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LPUE00000000.1