Enterococcus_B faecium
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_B; s__Enterococcus_B faecium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
NCBI Strain Identifiers D344RRF
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001544255.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 233
N50 Contigs 28,542 bp
Longest Contig 109,636 bp
Scaffold Count 207
N50 Scaffolds 35,830 bp
Longest Scaffold 118,347 bp
Genome Size 2,982,307 bp
Protein Count 3,029
Coding Density 85.78%
GC Percentage 37.94%
Ambiguous Bases 34
GTDB representative GCA_001544255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM158209v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04338419
Country France
Date 2016-3-8
Genbank Assembly Accession GCA_001582095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,137
Refseq Category na
Seq Rel Date 2016/03/08
Spanned Gaps 26
Species Taxid 1352
SSU Count 1
Submitter Brown University/Rhode Island Hospital
Taxid 1352
Total Gap Length 1683
Translation Table 11
tRNA Count (total) 61
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOQQ00000000.1