Gluconobacter oxydans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Gluconobacter; s__Gluconobacter oxydans
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Gluconobacter; s__Gluconobacter oxydans
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Gluconobacter; s__Gluconobacter oxydans
NCBI Strain Identifiers LMG 27012
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006539685.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 56
N50 Contigs 288,444 bp
Longest Contig 363,247 bp
Scaffold Count 56
N50 Scaffolds 288,444 bp
Longest Scaffold 363,247 bp
Genome Size 2,996,121 bp
Protein Count 2,781
Coding Density 91.38%
GC Percentage 60.97%
Ambiguous Bases N/A
GTDB representative GCA_006539685.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM158104v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03799296
Country Belgium
Date 2016-3-7
Genbank Assembly Accession GCA_001581045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Rakam fruit
Latitude Longitude None
Molecule Count N/A
CDS Count 2,750
Refseq Category na
Seq Rel Date 2016/03/07
Spanned Gaps 0
Species Taxid 442
SSU Count 1
Submitter Ghent University
Taxid 442
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material assembly from synonym type material
Unspanned Gaps 0
Version Status latest
WGS Master LHZW00000000.1