Acetobacter tropicalis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Acetobacter; s__Acetobacter tropicalis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Acetobacter; s__Acetobacter tropicalis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Acetobacter; s__Acetobacter tropicalis
NCBI Strain Identifiers LMG 1663
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001580915.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 132
N50 Contigs 98,274 bp
Longest Contig 471,083 bp
Scaffold Count 132
N50 Scaffolds 98,274 bp
Longest Scaffold 471,083 bp
Genome Size 3,769,631 bp
Protein Count 3,471
Coding Density 88.01%
GC Percentage 55.60%
Ambiguous Bases N/A
GTDB representative GCA_001580915.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM158094v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03799291
Country Belgium
Date 2016-3-7
Genbank Assembly Accession GCA_001580945.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Fermenting putrified meat sample
Latitude Longitude None
Molecule Count N/A
CDS Count 3,361
Refseq Category na
Seq Rel Date 2016/03/07
Spanned Gaps 0
Species Taxid 104102
SSU Count 1
Submitter Ghent University
Taxid 104102
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LHZT00000000.1