Gluconobacter oxydans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Gluconobacter; s__Gluconobacter oxydans
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Gluconobacter; s__Gluconobacter oxydans
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Gluconobacter; s__Gluconobacter oxydans
NCBI Strain Identifiers LMG 1676
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006539685.1)
Genome Characteristics
CheckM Completeness 99.5%
CheckM Contamination 0.75%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 180
N50 Contigs 41,510 bp
Longest Contig 187,145 bp
Scaffold Count 180
N50 Scaffolds 41,510 bp
Longest Scaffold 187,145 bp
Genome Size 2,819,252 bp
Protein Count 2,755
Coding Density 90.51%
GC Percentage 61.01%
Ambiguous Bases N/A
GTDB representative GCA_006539685.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM158070v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03799277
Country Belgium
Date 2016-3-7
Genbank Assembly Accession GCA_001580705.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Beer
Latitude Longitude None
Molecule Count N/A
CDS Count 2,694
Refseq Category na
Seq Rel Date 2016/03/07
Spanned Gaps 0
Species Taxid 442
SSU Count 1
Submitter Ghent University
Taxid 442
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LHZG00000000.1