Gluconobacter oxydans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Gluconobacter; s__Gluconobacter oxydans
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Gluconobacter; s__Gluconobacter oxydans
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Gluconobacter; s__Gluconobacter oxydans
NCBI Strain Identifiers LMG 1386
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006539685.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 22
N50 Contigs 208,179 bp
Longest Contig 505,526 bp
Scaffold Count 22
N50 Scaffolds 208,179 bp
Longest Scaffold 505,526 bp
Genome Size 2,857,892 bp
Protein Count 2,546
Coding Density 91.72%
GC Percentage 61.06%
Ambiguous Bases N/A
GTDB representative GCA_006539685.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM158062v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03799274
Country Belgium
Date 2016-3-7
Genbank Assembly Accession GCA_001580625.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source dried fruit of Diospyros sp.
Latitude Longitude None
Molecule Count N/A
CDS Count 2,515
Refseq Category na
Seq Rel Date 2016/03/07
Spanned Gaps 0
Species Taxid 442
SSU Count 1
Submitter Ghent University
Taxid 442
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LHZD00000000.1