Acetobacter malorum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Acetobacter; s__Acetobacter malorum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Acetobacter; s__Acetobacter malorum
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Acetobacter; s__Acetobacter malorum
NCBI Strain Identifiers LMG 1746
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (5 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.75%
CheckM Contamination 3.23%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 57
N50 Contigs 137,929 bp
Longest Contig 385,480 bp
Scaffold Count 57
N50 Scaffolds 137,929 bp
Longest Scaffold 385,480 bp
Genome Size 3,833,476 bp
Protein Count 3,499
Coding Density 89.52%
GC Percentage 56.67%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM158061v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03799273
Country Belgium
Date 2016-3-7
Genbank Assembly Accession GCA_001580615.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Rotting apple
Latitude Longitude None
Molecule Count N/A
CDS Count 3,409
Refseq Category na
Seq Rel Date 2016/03/07
Spanned Gaps 0
Species Taxid 178901
SSU Count 1
Submitter Ghent University
Taxid 178901
Total Gap Length 0
Translation Table 11
tRNA Count (total) 55
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LHZC00000000.1