Stenotrophomonas maltophilia_AK
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia_AK
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas sp. DDT-1
NCBI Strain Identifiers DDT-1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002799215.1)
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 0.1%
CheckM Strain Heterogeneity 50.0
5S Count 3
16S Count 3
23S Count 2
tRNA Count 20
Contig Count 97
N50 Contigs 80,532 bp
Longest Contig 236,154 bp
Scaffold Count 97
N50 Scaffolds 80,532 bp
Longest Scaffold 236,154 bp
Genome Size 4,514,569 bp
Protein Count 4,148
Coding Density 88.79%
GC Percentage 66.46%
Ambiguous Bases N/A
GTDB representative GCA_002799215.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM158055v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03764479
Country China
Date 2016-3-7
Genbank Assembly Accession GCA_001580555.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 4,170
Refseq Category na
Seq Rel Date 2016/03/07
Spanned Gaps 0
Species Taxid 1609637
SSU Count 3
Submitter Zhejiang University
Taxid 1609637
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LEKR00000000.1