Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers UTSW MRSA 55
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 98.95%
CheckM Contamination 2.53%
CheckM Strain Heterogeneity 88.24
5S Count 0
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 5
N50 Contigs 2,898,306 bp
Longest Contig 2,898,306 bp
Scaffold Count 5
N50 Scaffolds 2,898,306 bp
Longest Scaffold 2,898,306 bp
Genome Size 3,039,792 bp
Protein Count 2,864
Coding Density 82.18%
GC Percentage 32.66%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM158051v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04254471
Country USA: Children Hospital; Dallas; Texas
Date 2016-03-07
Genbank Assembly Accession GCA_001580515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source USA: Dallas Texas
Latitude Longitude 32.775833 N 96.79666700000001 W
Molecule Count 5
CDS Count 3,152
Refseq Category na
Seq Rel Date 2016/03/07
Spanned Gaps 0
Species Taxid 1280
SSU Count 6
Taxid 1280
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None