Bacteroides fragilis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis
NCBI Strain Identifiers KLE1257
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000025985.1)
Genome Characteristics
CheckM Completeness 99.16%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 145
N50 Contigs 70,724 bp
Longest Contig 185,220 bp
Scaffold Count 52
N50 Scaffolds 311,131 bp
Longest Scaffold 448,317 bp
Genome Size 5,206,456 bp
Protein Count 4,354
Coding Density 88.81%
GC Percentage 43.10%
Ambiguous Bases N/A
GTDB representative GCA_000025985.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM158010v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04024977
Country None
Date 2016-03-03
Genbank Assembly Accession GCA_001580105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source feces
Latitude Longitude None
Molecule Count N/A
CDS Count 4,594
Refseq Category na
Seq Rel Date 2016/03/03
Spanned Gaps 93
Species Taxid 817
SSU Count 2
Submitter The Genome Institute at Washington University
Taxid 817
Total Gap Length 9300
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LTZL00000000.1