Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli
NCBI Strain Identifiers 11601
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000254135.2)
Genome Characteristics
CheckM Completeness 98.7%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 77
N50 Contigs 138,196 bp
Longest Contig 386,296 bp
Scaffold Count 77
N50 Scaffolds 138,196 bp
Longest Scaffold 386,296 bp
Genome Size 1,957,712 bp
Protein Count 2,107
Coding Density 92.78%
GC Percentage 30.88%
Ambiguous Bases N/A
GTDB representative GCA_000254135.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM157956v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04038076
Country USA:Eastern North Carolina
Date 2016-3-3
Genbank Assembly Accession GCA_001579565.1
Genome Category Isolate
Genome Representation full
Isolate 11601
Isolation Source Turkey ceca
Latitude Longitude 35.7842626 N 78.6800256 W
Molecule Count N/A
CDS Count 2,056
Refseq Category na
Seq Rel Date 2016/03/03
Spanned Gaps 0
Species Taxid 195
SSU Count 1
Submitter North Carolina State University
Taxid 195
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LKCS00000000.1