Corynebacterium simulans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Corynebacterium; s__Corynebacterium simulans
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium simulans
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium simulans
NCBI Strain Identifiers 1B08
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001586215.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.43%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 66
N50 Contigs 120,055 bp
Longest Contig 411,336 bp
Scaffold Count 66
N50 Scaffolds 120,055 bp
Longest Scaffold 411,336 bp
Genome Size 2,653,230 bp
Protein Count 2,517
Coding Density 90.45%
GC Percentage 59.23%
Ambiguous Bases N/A
GTDB representative GCA_001586215.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM157927v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03455924
Country USA
Date 2016-3-2
Genbank Assembly Accession GCA_001579275.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source skin swab
Latitude Longitude 38.984652 N 77.094709 W
Molecule Count N/A
CDS Count 2,483
Refseq Category na
Seq Rel Date 2016/03/02
Spanned Gaps 0
Species Taxid 146827
SSU Count 1
Submitter NHGRI
Taxid 146827
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LTEB00000000.1