Streptococcus gallolyticus
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus gallolyticus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus gallolyticus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus gallolyticus
NCBI Strain Identifiers DD03
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002000985.1)
Genome Characteristics
CheckM Completeness 91.01%
CheckM Contamination 0.56%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 625
N50 Contigs 8,252 bp
Longest Contig 50,309 bp
Scaffold Count 190
N50 Scaffolds 234,394 bp
Longest Scaffold 528,242 bp
Genome Size 2,548,002 bp
Protein Count 2,470
Coding Density 74.75%
GC Percentage 37.47%
Ambiguous Bases N/A
GTDB representative GCA_002000985.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM157913v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04324322
Country Madagascar: Kirindy Forest
Date 2016-3-2
Genbank Assembly Accession GCA_001579135.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source oral cavity
Latitude Longitude None
Molecule Count N/A
CDS Count 2,555
Refseq Category na
Seq Rel Date 2016/03/02
Spanned Gaps 435
Species Taxid 315405
SSU Count 1
Submitter University of Kaiserslautern
Taxid 315405
Total Gap Length 197984
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LQXV00000000.1