Alteromonas macleodii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Alteromonadaceae; g__Alteromonas; s__Alteromonas macleodii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Alteromonadaceae; g__Alteromonas; s__Alteromonas macleodii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Alteromonadaceae; g__Alteromonas; s__Alteromonas macleodii
NCBI Strain Identifiers HOT1A3
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000172635.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.17%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 2
N50 Contigs 4,652,873 bp
Longest Contig 4,652,873 bp
Scaffold Count 2
N50 Scaffolds 4,652,873 bp
Longest Scaffold 4,652,873 bp
Genome Size 4,801,807 bp
Protein Count 4,151
Coding Density 87.39%
GC Percentage 44.67%
Ambiguous Bases 4
GTDB representative GCA_000172635.2
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM157851v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03835502
Country USA: Hawaii; station ALOHA
Date 2016-3-2
Genbank Assembly Accession GCA_001578515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source water(ENVO:00002006)
Latitude Longitude 22.45 N 158 W
Molecule Count 2
CDS Count 4,104
Refseq Category na
Seq Rel Date 2016/03/02
Spanned Gaps 0
Species Taxid 28108
SSU Count 5
Submitter University of Haifa
Taxid 28108
Total Gap Length 0
Translation Table 11
tRNA Count (total) 71
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None