Bacillus_E coagulans_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae_C; g__Bacillus_E; s__Bacillus_E coagulans_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus coagulans
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus coagulans
NCBI Strain Identifiers Unique IS-2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000169195.2)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 143
N50 Contigs 51,676 bp
Longest Contig 199,030 bp
Scaffold Count 143
N50 Scaffolds 51,676 bp
Longest Scaffold 199,030 bp
Genome Size 3,446,692 bp
Protein Count 3,392
Coding Density 83.06%
GC Percentage 46.41%
Ambiguous Bases N/A
GTDB representative GCA_000169195.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM157845v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03377049
Country India
Date 2016-3-2
Genbank Assembly Accession GCA_001578455.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source human fecal contaminated soil
Latitude Longitude None
Molecule Count N/A
CDS Count 3,402
Refseq Category na
Seq Rel Date 2016/03/02
Spanned Gaps 0
Species Taxid 1398
SSU Count 1
Submitter CSIR-Institute of Microbial Technology
Taxid 1398
Total Gap Length 0
Translation Table 11
tRNA Count (total) 80
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JZDH00000000.1