Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus pumilus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus pumilus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus pumilus
NCBI Strain Identifiers SH-B9
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900186955.1)
Genome Characteristics
CheckM Completeness 99.59%
CheckM Contamination 0.21%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 2
N50 Contigs 3,787,586 bp
Longest Contig 3,787,586 bp
Scaffold Count 2
N50 Scaffolds 3,787,586 bp
Longest Scaffold 3,787,586 bp
Genome Size 3,878,815 bp
Protein Count 3,918
Coding Density 87.99%
GC Percentage 41.43%
Ambiguous Bases N/A
GTDB representative GCA_900186955.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM157820v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03372270
Country Netherlands: Wageningen
Date 2016-3-1
Genbank Assembly Accession GCA_001578205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sugar beet rhizosphere
Latitude Longitude None
Molecule Count 2
CDS Count 3,843
Refseq Category representative genome
Seq Rel Date 2016/03/01
Spanned Gaps 0
Species Taxid 1408
SSU Count 8
Submitter Wageningen University
Taxid 1408
Total Gap Length 0
Translation Table 11
tRNA Count (total) 81
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None