GCF_001576235.1
Escherichia flexneri
Isolate HQ 5S/16S/23S 20 tRNAs
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.07%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 74
N50 Contigs 175,841 bp
Longest Contig 328,663 bp
Scaffold Count 70
N50 Scaffolds 175,841 bp
Longest Scaffold 328,663 bp
Genome Size 4,798,068 bp
Protein Count 4,556
Coding Density 88.21%
GC Percentage 50.68%
Ambiguous Bases 2
GTDB representative GCA_002950215.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM157623v1
Assembly Type na
Bioproject PRJNA224116
Biosample SAMN04334747
Country United Kingdom: Scotland
Date 2016-02-26
Genbank Assembly Accession GCA_001576235.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source mastitis
Latitude Longitude None
Molecule Count N/A
CDS Count 4,642
Refseq Category na
Seq Rel Date 2016/02/26
Spanned Gaps 4
Species Taxid 562
SSU Count 4
Submitter KOlimastIR
Taxid 562
Total Gap Length 674
Translation Table 11
tRNA Count (total) 77
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOPC00000000.1