GCF_001575385.1
Escherichia flexneri
Isolate HQ 5S/16S/23S 20 tRNAs
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 3
23S Count 1
tRNA Count 20
Contig Count 87
N50 Contigs 120,385 bp
Longest Contig 249,715 bp
Scaffold Count 69
N50 Scaffolds 151,638 bp
Longest Scaffold 323,503 bp
Genome Size 5,019,853 bp
Protein Count 4,754
Coding Density 87.63%
GC Percentage 50.56%
Ambiguous Bases 30
GTDB representative GCA_002950215.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM157538v1
Assembly Type na
Bioproject PRJNA224116
Biosample SAMN04334722
Country United Kingdom: Scotland
Date 2016-02-26
Genbank Assembly Accession GCA_001575385.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source mastitis
Latitude Longitude None
Molecule Count N/A
CDS Count 4,910
Refseq Category na
Seq Rel Date 2016/02/26
Spanned Gaps 18
Species Taxid 562
SSU Count 5
Submitter KOlimastIR
Taxid 562
Total Gap Length 1837
Translation Table 11
tRNA Count (total) 81
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOOD00000000.1