Pseudomonas_A balearica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_A; s__Pseudomonas_A balearica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas balearica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas stutzeri group; s__Pseudomonas balearica
NCBI Strain Identifiers st101
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000818015.1)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.27%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 64
N50 Contigs 170,050 bp
Longest Contig 400,281 bp
Scaffold Count 45
N50 Scaffolds 216,584 bp
Longest Scaffold 805,012 bp
Genome Size 4,363,152 bp
Protein Count 4,050
Coding Density 90.22%
GC Percentage 64.94%
Ambiguous Bases N/A
GTDB representative GCA_000818015.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM157502v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04334590
Country None
Date 2017-1-19
Genbank Assembly Accession GCA_001575025.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source rhizosphere
Latitude Longitude None
Molecule Count N/A
CDS Count 4,043
Refseq Category na
Seq Rel Date 2017/01/19
Spanned Gaps 19
Species Taxid 74829
SSU Count 1
Submitter University of Gothenburg - CCUG
Taxid 74829
Total Gap Length 644
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LONF00000000.2