Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers U41
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.58%
CheckM Strain Heterogeneity 36.36
5S Count 8
16S Count 5
23S Count 5
tRNA Count 19
Contig Count 210
N50 Contigs 53,277 bp
Longest Contig 156,295 bp
Scaffold Count 210
N50 Scaffolds 53,277 bp
Longest Scaffold 156,295 bp
Genome Size 5,857,665 bp
Protein Count 5,579
Coding Density 87.35%
GC Percentage 56.80%
Ambiguous Bases 70
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM157450v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04498375
Country Saudi Arabia: Makkah
Date 2016-02-25
Genbank Assembly Accession GCA_001574505.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source urine
Latitude Longitude 21.18014507823011 N 40.03125071525574 E
Molecule Count 6
CDS Count 5,868
Refseq Category na
Seq Rel Date 2016/02/25
Spanned Gaps 0
Species Taxid 573
SSU Count 7
Submitter Umm Al-Qura University
Taxid 573
Total Gap Length 0
Translation Table 11
tRNA Count (total) 77
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LSTN00000000.1