Clostridium botulinum_A
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
NCBI Strain Identifiers K15
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000827935.1)
Genome Characteristics
CheckM Completeness 99.19%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 9
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 114
N50 Contigs 100,195 bp
Longest Contig 287,261 bp
Scaffold Count 114
N50 Scaffolds 100,195 bp
Longest Scaffold 287,261 bp
Genome Size 3,997,935 bp
Protein Count 3,725
Coding Density 83.59%
GC Percentage 27.17%
Ambiguous Bases N/A
GTDB representative GCA_000827935.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM157379v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03779997
Country Finland
Date 2016-2-25
Genbank Assembly Accession GCA_001573795.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source trout
Latitude Longitude None
Molecule Count N/A
CDS Count 3,635
Refseq Category na
Seq Rel Date 2016/02/25
Spanned Gaps 0
Species Taxid 1491
SSU Count 1
Submitter Northern Arizona University
Taxid 1491
Total Gap Length 0
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LFQW00000000.1