Clostridium_F botulinum_A
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium_F; s__Clostridium_F botulinum_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
NCBI Strain Identifiers AM370
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001889325.1)
Genome Characteristics
CheckM Completeness 99.31%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 31
N50 Contigs 398,258 bp
Longest Contig 711,668 bp
Scaffold Count 31
N50 Scaffolds 398,258 bp
Longest Scaffold 711,668 bp
Genome Size 4,269,660 bp
Protein Count 4,030
Coding Density 82.57%
GC Percentage 27.69%
Ambiguous Bases N/A
GTDB representative GCA_001889325.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM157375v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03779990
Country Australia
Date 2016-2-25
Genbank Assembly Accession GCA_001573755.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source salted fish
Latitude Longitude None
Molecule Count N/A
CDS Count 4,027
Refseq Category na
Seq Rel Date 2016/02/25
Spanned Gaps 0
Species Taxid 1491
SSU Count 1
Submitter Northern Arizona University
Taxid 1491
Total Gap Length 0
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LFPJ00000000.1