Clostridium_F botulinum
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium_F; s__Clostridium_F botulinum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
NCBI Strain Identifiers AM1295
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001276985.1)
Genome Characteristics
CheckM Completeness 99.31%
CheckM Contamination 0.69%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 34
N50 Contigs 410,269 bp
Longest Contig 866,701 bp
Scaffold Count 34
N50 Scaffolds 410,269 bp
Longest Scaffold 866,701 bp
Genome Size 3,900,045 bp
Protein Count 3,640
Coding Density 82.20%
GC Percentage 27.99%
Ambiguous Bases N/A
GTDB representative GCA_001276985.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM157372v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03779954
Country None
Date 2016-2-25
Genbank Assembly Accession GCA_001573725.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source suspected reference strain
Latitude Longitude None
Molecule Count N/A
CDS Count 3,713
Refseq Category na
Seq Rel Date 2016/02/25
Spanned Gaps 0
Species Taxid 1491
SSU Count 3
Submitter Northern Arizona University
Taxid 1491
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LFPI00000000.1