Clostridium botulinum_A
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
NCBI Strain Identifiers Prevot Ped 1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000827935.1)
Genome Characteristics
CheckM Completeness 99.19%
CheckM Contamination 0.9%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 81
N50 Contigs 125,071 bp
Longest Contig 337,789 bp
Scaffold Count 81
N50 Scaffolds 125,071 bp
Longest Scaffold 337,789 bp
Genome Size 3,791,027 bp
Protein Count 3,471
Coding Density 84.02%
GC Percentage 27.16%
Ambiguous Bases N/A
GTDB representative GCA_000827935.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM157363v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03779995
Country Greenland
Date 2016-2-25
Genbank Assembly Accession GCA_001573635.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sea mud
Latitude Longitude None
Molecule Count N/A
CDS Count 3,402
Refseq Category na
Seq Rel Date 2016/02/25
Spanned Gaps 0
Species Taxid 1491
SSU Count 1
Submitter Northern Arizona University
Taxid 1491
Total Gap Length 0
Translation Table 11
tRNA Count (total) 65
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LFPD00000000.1