Clostridium botulinum_A
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
NCBI Strain Identifiers CDC 5247
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000827935.1)
Genome Characteristics
CheckM Completeness 99.19%
CheckM Contamination 0.56%
CheckM Strain Heterogeneity 50.0
5S Count 7
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 51
N50 Contigs 203,210 bp
Longest Contig 527,445 bp
Scaffold Count 51
N50 Scaffolds 203,210 bp
Longest Scaffold 527,445 bp
Genome Size 3,839,610 bp
Protein Count 3,533
Coding Density 83.86%
GC Percentage 27.07%
Ambiguous Bases N/A
GTDB representative GCA_000827935.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM157361v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03779998
Country USA: Alaska
Date 2016-2-25
Genbank Assembly Accession GCA_001573615.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,460
Refseq Category na
Seq Rel Date 2016/02/25
Spanned Gaps 0
Species Taxid 1491
SSU Count 1
Submitter Northern Arizona University
Taxid 1491
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LFPC00000000.1