Lactobacillus helveticus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus helveticus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus helveticus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus helveticus
NCBI Strain Identifiers Lh 23
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000160855.1)
Genome Characteristics
CheckM Completeness 99.03%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 312
N50 Contigs 17,766 bp
Longest Contig 71,470 bp
Scaffold Count 312
N50 Scaffolds 17,766 bp
Longest Scaffold 71,470 bp
Genome Size 2,100,231 bp
Protein Count 2,433
Coding Density 85.45%
GC Percentage 36.53%
Ambiguous Bases N/A
GTDB representative GCA_000160855.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM157281v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04453675
Country Italy
Date 2016-2-25
Genbank Assembly Accession GCA_001572815.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Undefined natural whey starter
Latitude Longitude None
Molecule Count N/A
CDS Count 2,274
Refseq Category na
Seq Rel Date 2016/02/25
Spanned Gaps 0
Species Taxid 1587
SSU Count 1
Submitter University of Parma
Taxid 1587
Total Gap Length 0
Translation Table 11
tRNA Count (total) 61
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LSVJ00000000.1