Lactobacillus helveticus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus helveticus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus helveticus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus helveticus
NCBI Strain Identifiers Lh 12
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000160855.1)
Genome Characteristics
CheckM Completeness 99.03%
CheckM Contamination 0.32%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 334
N50 Contigs 18,660 bp
Longest Contig 66,206 bp
Scaffold Count 334
N50 Scaffolds 18,660 bp
Longest Scaffold 66,206 bp
Genome Size 2,127,829 bp
Protein Count 2,504
Coding Density 85.92%
GC Percentage 36.56%
Ambiguous Bases N/A
GTDB representative GCA_000160855.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM157280v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04453674
Country Italy
Date 2016-2-25
Genbank Assembly Accession GCA_001572805.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Undefined natural whey starter
Latitude Longitude None
Molecule Count N/A
CDS Count 2,352
Refseq Category na
Seq Rel Date 2016/02/25
Spanned Gaps 0
Species Taxid 1587
SSU Count 1
Submitter University of Parma
Taxid 1587
Total Gap Length 0
Translation Table 11
tRNA Count (total) 61
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LSVI00000000.1