Herbidospora cretacea
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptosporangiales; f__Streptosporangiaceae; g__Herbidospora; s__Herbidospora cretacea
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptosporangiales; f__Streptosporangiaceae; g__Herbidospora; s__Herbidospora cretacea
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptosporangiales; f__Streptosporangiaceae; g__Herbidospora; s__Herbidospora cretacea
NCBI Strain Identifiers NBRC 15474
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.32%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 5
23S Count 2
tRNA Count 20
Contig Count 49
N50 Contigs 238,756 bp
Longest Contig 679,645 bp
Scaffold Count 36
N50 Scaffolds 383,282 bp
Longest Scaffold 703,677 bp
Genome Size 8,282,092 bp
Protein Count 7,422
Coding Density 91.26%
GC Percentage 70.73%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM157060v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00029379
Country None
Date 2016-1-26
Genbank Assembly Accession GCA_001570605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 7,384
Refseq Category na
Seq Rel Date 2016/01/26
Spanned Gaps 13
Species Taxid 28444
SSU Count 5
Submitter National Institute of Technology and Evaluation Biological Resource Center
Taxid 28444
Total Gap Length 4378
Translation Table 11
tRNA Count (total) 63
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BBXG00000000.1