Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
NCBI Strain Identifiers NGUA30
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 50.0
5S Count 8
16S Count 7
23S Count 13
tRNA Count 20
Contig Count 125
N50 Contigs 251,903 bp
Longest Contig 461,908 bp
Scaffold Count 125
N50 Scaffolds 251,903 bp
Longest Scaffold 461,908 bp
Genome Size 4,867,532 bp
Protein Count 4,599
Coding Density 87.31%
GC Percentage 52.18%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM157012v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00043368
Country None
Date 2016-1-22
Genbank Assembly Accession GCA_001570125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,883
Refseq Category na
Seq Rel Date 2016/01/22
Spanned Gaps 0
Species Taxid 28901
SSU Count 9
Submitter South Dakota State University
Taxid 28901
Total Gap Length 0
Translation Table 11
tRNA Count (total) 82
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BCPC00000000.1