Leptospira borgpetersenii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii
NCBI Strain Identifiers 56613
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003046425.1)
Genome Characteristics
CheckM Completeness 98.82%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 305
N50 Contigs 20,359 bp
Longest Contig 82,031 bp
Scaffold Count 305
N50 Scaffolds 20,359 bp
Longest Scaffold 82,031 bp
Genome Size 3,758,628 bp
Protein Count 3,397
Coding Density 82.24%
GC Percentage 40.29%
Ambiguous Bases N/A
GTDB representative GCA_003046425.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM156948v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02947778
Country China
Date 2016-2-24
Genbank Assembly Accession GCA_001569485.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Anhui; China
Latitude Longitude 31.52 N 117.17 E
Molecule Count N/A
CDS Count 3,638
Refseq Category na
Seq Rel Date 2016/02/24
Spanned Gaps 0
Species Taxid 174
SSU Count 1
Submitter Chinese National Human Genome Center at Shanghai
Taxid 174
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQSA00000000.1