Leptospira borgpetersenii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii
NCBI Strain Identifiers 56604
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003046425.1)
Genome Characteristics
CheckM Completeness 98.82%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 229
N50 Contigs 32,749 bp
Longest Contig 103,978 bp
Scaffold Count 229
N50 Scaffolds 32,749 bp
Longest Scaffold 103,978 bp
Genome Size 3,900,819 bp
Protein Count 3,494
Coding Density 82.33%
GC Percentage 40.01%
Ambiguous Bases N/A
GTDB representative GCA_003046425.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM156946v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02947776
Country China
Date 2016-2-24
Genbank Assembly Accession GCA_001569465.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Sichuan; China
Latitude Longitude 30.40 N 104.04 E
Molecule Count N/A
CDS Count 3,747
Refseq Category na
Seq Rel Date 2016/02/24
Spanned Gaps 0
Species Taxid 174
SSU Count 1
Submitter Chinese National Human Genome Center at Shanghai
Taxid 174
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQRY00000000.1