Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira weilii
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira weilii
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira weilii
NCBI Strain Identifiers 56105
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000244815.3)
Genome Characteristics
CheckM Completeness 98.82%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 249
N50 Contigs 34,095 bp
Longest Contig 116,660 bp
Scaffold Count 249
N50 Scaffolds 34,095 bp
Longest Scaffold 116,660 bp
Genome Size 4,033,664 bp
Protein Count 3,725
Coding Density 83.09%
GC Percentage 40.41%
Ambiguous Bases N/A
GTDB representative GCA_000244815.3
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM156937v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02947818
Country Indonesia
Date 2016-2-24
Genbank Assembly Accession GCA_001569375.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Indonesia
Latitude Longitude 6.10 S 106.49 E
Molecule Count N/A
CDS Count 3,969
Refseq Category na
Seq Rel Date 2016/02/24
Spanned Gaps 0
Species Taxid 28184
SSU Count 1
Submitter Chinese National Human Genome Center at Shanghai
Taxid 28184
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQRN00000000.1