Leptospira santarosai
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira santarosai
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira santarosai
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira santarosai
NCBI Strain Identifiers 56164
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000313175.2)
Genome Characteristics
CheckM Completeness 97.65%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 288
N50 Contigs 47,071 bp
Longest Contig 127,998 bp
Scaffold Count 288
N50 Scaffolds 47,071 bp
Longest Scaffold 127,998 bp
Genome Size 4,032,386 bp
Protein Count 3,795
Coding Density 84.46%
GC Percentage 41.60%
Ambiguous Bases N/A
GTDB representative GCA_000313175.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM156928v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02947897
Country USA
Date 2016-2-24
Genbank Assembly Accession GCA_001569285.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Georgia; United States
Latitude Longitude 32.60 N 82.70 W
Molecule Count N/A
CDS Count 4,103
Refseq Category na
Seq Rel Date 2016/02/24
Spanned Gaps 0
Species Taxid 28183
SSU Count 1
Submitter Chinese National Human Genome Center at Shanghai
Taxid 28183
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQRH00000000.1